University of Tübingen: Johannes Eichner

Johannes Eichner

06/2002: Abitur at the Remstal-Gymnasium Weinstadt
10/2002 - 09/2003: Study of computer science (business informatics) at University of Mannheim
10/2003 - 04/2009: Study of computer science (bioinformatics) at University of Tübingen
12/2007 - 01/2009: Student assistant at the Friedrich Miescher Laboratoryof the Max Planck Society Tübingen
06/2008: Diploma thesis on "Analysis of alternative transcripts in A. thaliana with whole-genome arrays" at the Friedrich Miescher Laboratoryof the Max Planck Society Tübingen
11/2008 - 12/2008: Consultant at BIOBASE GmbH,Wolfenbüttel
Since 04/2009: Research assistant at the Department of Computer Architecture, University of Tübingen

Spher4Sys: Systems biology based approach for preclinical lead compound development using an in-vivo like spheroid test system
MARCAR: Biomarkers and molecular tumor classification for non-genotoxic carcinogenesis
SABINE: Support vector regression-based method for the prediction of transcription factor binding specificities
RA Galaxy Webservices: A web-based framework for bioinformatics tools.

[1]	Clemens Wrzodek, Finja Büchel, Georg Hinselmann, Johannes Eichner, Florian Mittag, and Andreas Zell. Linking the epigenome to the genome: Correlation of different features to DNA methylation of CpG islands. PLoS ONE, 7(4):e35327, 04 2012. [ DOI \| details \| link \| pdf ]
[2]	Johannes Eichner, Georg Zeller, Sascha Laubinger, and Gunnar Raetsch. Support vector machines-based identification of alternative splicing in arabidopsis thaliana from whole-genome tiling arrays. BMC Bioinformatics, 12(1):55, Feb 2011. [ DOI \| link ]
[3]	Adrian Schröder, Johannes Eichner, Jochen Supper, Jonas Eichner, Dierk Wanke, Carsten Henneges, and Andreas Zell. Predicting DNA-Binding Specificities of Eukaryotic Transcription Factors. PLoS ONE, 5(11):e13876, November 2010. [ DOI \| details \| link \| pdf ]

Untersuchung regulatorischer Zusammenhänge aus Expressionsdaten: Johannes Eichner; University of Tübingen, Prof. Dr. Andreas Zell, July 2007

Analysis of alternative transcripts in A. thaliana with whole-genome arrays: Johannes Eichner; Friedrich Miescher Laboratory of the Max Planck Society Tübingen, Dr. Gunnar Rätsch, and University of Tübingen, Dr. Kay Nieselt, June 2008

Eberhard-Karls-Universität Tübingen

Wilhelm-Schickard-Institut für Informatik

Lehrstuhl Kognitive Systeme

Sand 1

D - 72076 Tübingen

Germany

Tel: (+49/0) 7071 / 29 78970

Fax: (+49/0) 7071 / 29 5091

Email: johannes.eichner at uni-tuebingen.de