Andreas Dräger
Background
- 1991 - 1999: Gymnasium (high school) “Am Markt” in Hettstedt
- 2000 - 2006: Studies of Bioinformatics at the Martin-Luther-University Halle-Wittenberg
- 2001: Internship at the Max Planck Institute for Molecular Genetics, Berlin, at the group of Dr. Richard Reinhard
- 2004: Internship at the University of Illinois at Chicago, United States, Microbiology and Immunology at the group of Prof. Dr. Simon Silver
- since February 2006: Research assistant at the Center for Bioinformatics (ZBIT), University of Tübingen
Research Interests
- Evolutionary algorithms
- Metabolic and gene-regulatory networks
- Systems biology
- Application and developement of BioJava and BioSQL
Current Projects
- HepatoSys: Systems biology of the human liver, especially detoxification processes in conjunction with statin treatment
- German National Genome Research Network (NGFN-Plus): medical genome research with focus on Parkinson's disease
- Inference of gene-regulatory networks
- Identification and analysis of metabolic networks given experimental data
Publications
- ModuleMaster: a new tool to decipher transcriptional regulatory networks
- Clemens Wrzodek, Adrian Schröder, Andreas Dräger, Dierk Wanke, Kenneth W. Berendzen, Marcel Kronfeld, Klaus Harter, and Andreas Zell
- Biosystems 2009, In Press, accepted.
- [BibTeX], [pdf]
- On the Benefits of of Multimodal Optimization for Metabolic Network Modeling
- Marcel Kronfeld, Moritz Aschoff, Andreas Dräger, and Andreas Zell
- German Conference on Bioinformatics (GCB 2009), Halle (Saale), Germany, pp. 191-200, 2009.
- [BibTeX], [pdf]
- BowTieBuilder: modeling signal transduction pathways
- Jochen Supper, Lucía Spangenberg, Hannes Planatscher, Andreas Dräger, Adrian Schröder, and Andreas Zell
- BMC Systems Biology 2009, (30 June 2009).
- [BibTeX], [pdf]
- SBML2LaTeX: Conversion of SBML files into human-readable reports
- Andreas Dräger, Hannes Planatscher, Dieudonné Motsou Wouamba, Adrian Schröder, Michael Hucka, Lukas Endler, Martin Golebiewski, Wolfgang Müller, and Andreas Zell
- Bioinformatics 2009, (23 March 2009).
- [BibTeX], [pdf]
- Modeling metabolic networks in C. glutamicum: a comparison of rate laws in combination with various parameter optimization strategies
- Andreas Dräger, Marcel Kronfeld, Michael Johannes Ziller, Jochen Supper, Hannes Planatscher, Jørgen Barsett Magnus, Marco Oldiges, Oliver Kohlbacher, and Andreas Zell
- BMC Systems Biology 2009, 3:5 (14 January 2009).
- [BibTeX], [pdf]
- BioJava: an Open-Source Framework for Bioinformatics
- Richard C. G. Holland, Thomas Down, Matthew Pocock, Andreas Prlić, David Huen, Keith James, Sylvain Foisy, Andreas Dräger, Andy Yates, Michael Heuer, and Mark J. Schreiber
- Bioinformatics 2008, (8 August 2008).
- [BibTeX], [pdf]
- SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks
- Andreas Dräger, Nadine Hassis, Jochen Supper, Adrian Schröder, and Andreas Zell
- BMC Systems Biology 2008, 2:39 (30 April 2008).
- [BibTeX], [pdf]
- Benchmarking Evolutionary Algorithms on Convenience Kinetics Models of the Valine and Leucine Biosynthesis in C. glutamicum
- Andreas Dräger, Marcel Kronfeld, Jochen Supper, Hannes Planatscher, Jørgen Barsett Magnus, Marco Oldiges, and Andreas Zell
- IEEE Congress on Evolutionary Computation (CEC 2007), Singapore, pp. 896-903, 2007.
- [BibTeX], [pdf]
- Comparing Various Evolutionary Algorithms on the Parameter Optimization of the Valine and Leucine Biosynthesis in Corynebacterium glutamicum
- Andreas Dräger, Jochen Supper, Hannes Planatscher, Jørgen Barsett Magnus, Marco Oldiges, and Andreas Zell
- IEEE Congress on Evolutionary Computation (CEC 2007), Singapore, pp. 620-627, 2007.
- [BibTeX], [pdf]
- Infering Gene Regulatory Networks by Machine Learning Methods
- Jochen Supper, Holger Fröhlich, Christian Spieth, Andreas Dräger, and Andreas Zell
- Series on Advances in Bioinformatics and Computational Biology, vol 5, pp. 267-276, Asia-Pacific Bioinformatics Conference (APBC 2007), Hong Kong, 2007.
- [BibTeX], [pdf]
- Inferring Genetic Networks from Gene Expression Data
- Andreas Dräger, Nora Speer, Christian Spieth, Jochen Supper, and Andreas Zell
- Biotechnica 2009, Internationale Messe für Biotechnologie, Hannover, Germany, (8 October 2009).
- Metabolic modeling of Corynebacterium glutamicum: a comparison of rate lwas in combination with various parameter optimisation strategies
- Andreas Dräger, Marcel Kronfeld, Michael Johannes Ziller, Jochen Supper, Hannes Planatscher, Jørgen Barsett Magnus, Marco Oldiges, Oliver Kohlbacher, and Andreas Zell
- ACHEMA 2009, 29. internationaler Ausstellungskongress für chemische Technik, Umweltschutz und Biotechnologie, Frankfurt am Main, Germany, (13 May 2009).
- A Tool for Interactive Comparative Sequence Analysis
- Andreas Dräger, Dietrich H. Nies, and Stefan Posch
- German Conference on Bioinformatics (GCB) 2006, Tübingen, Germany
- [pdf]
- Automatic and comparative analysis of bacterial genomes with main focus on Ralstonia/Cupriavidus species and related Proteobacteria ("Automatische und vergleichende Analyse bakterieller Genome mit Schwerpunkt auf Ralstonia/Cupriavidus Arten sowie verwandten Proteobakerien"), [English summary; pdf]
- Diplomarbeit, Martin-Luther-University Halle-Wittenberg, Department of Bioinformatics and Pattern Recognition, Prof. Dr.-Ing. Stefan Posch, and Department of Molecular Microbiology, Prof. Dr. Dietrich H. Nies, 2005
- Search for frequent protein fragments considering mutations and gaps ("Suche häufiger Proteinfragmente unter Berücksichtigung von Mutationen und Lücken")
- Projektarbeit, Martin-Luther-University Halle-Wittenberg, Department of Databases and Information Systems, Dr. Alexander Hinneburg, 2004
Selected Presentations
Selected Posters
Theses
Address, Phone, Fax, E-Mail
Eberhard-Karls-Universität TübingenWilhelm-Schickard-Institut für Informatik
Lehrstuhl Rechnerarchitektur
Sand 14
72076 Tübingen
Germany
| Phone: | +49 70 71 29-7 04 36 | |
| Fax: | +49 70 71 29-50 91 | |
| E-Mail: | andreas.draeger at uni-tuebingen.de |

