Identification of novel metabolite biomarkers for type 2 diabetes
The main target of this project is the identification of
metabolite patterns,
which can be used to develop a diagnostic test for pre-diabetic
metabolic traits.
Therefore, statistics, mathematical modelling and pattern recognition
are used to
analyze mass spectrometry data samples of the TULIP (TUebingen
Lifestyle Intervention Program) cohort. The mathematical modelling and
classification is
based on “differentially expressed” mass-profiles
of individuals, who show metabolic
traits, i.e. who are at high risk to develop type 2 Diabetes mellitus.
Machine learning
methods are applied to infer a mathematical method, which is able to
classify
"pre-diabetic" versus "non diabetic" probands from their
mass-profile-patterns
only. The next step involves the application of Evolutionary Algorithms
to extract
an optimal metabolite pattern, which on the one hand is able to
classify with high
sensitivity and specificity and, on the other hand, has minimal
complexity.
Contact: Holger Franken, Raum A312, Tel. (07071) 29-78970, franken at informatik.uni-tuebingen.de


